PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G031500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 252aa    MW: 28269.9 Da    PI: 7.5385
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G031500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26e-1381127354
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         ++h+e+E+rRR+riNs +++Lr llP +      K +Ka+ L k+v+ +k+L
  Prupe.7G031500.1.p  81 KNHKEAEKRRRERINSHLDKLRGLLPCN-----SKTDKASLLAKVVQRVKEL 127
                         58*************************8.....7************999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.44778127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-1081127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.14E-1181130No hitNo description
SuperFamilySSF474592.22E-1482142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-1482136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-1284133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048734.80E-4166230No hitNo description
Gene3DG3DSA:3.30.70.2602.3E-5166232No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0005634Cellular Componentnucleus
GO:0009941Cellular Componentchloroplast envelope
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MQPADHQNQE LYRFLAQNGL INMNNNNGSY VGFPGGASCD QFSAMQSFCS SSSYNYYPLE  60
VSGVSTEHET SPQDRALAAL KNHKEAEKRR RERINSHLDK LRGLLPCNSK TDKASLLAKV  120
VQRVKELKQQ TSELTELESF PSETDEITVL SSDDYSSDGR IIFKASLCCE DRTDLLPDLI  180
EILKSLHLKT LRAEMATLGG RIRNVLIVAA DKDHTIESVH FLQNALKSLL ERSNASERSK  240
RRRVLDRTLV L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239243KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894240.0KP689424.1 Prunus pseudocerasus isolate Unigene8039 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008240669.10.0PREDICTED: transcription factor bHLH106-like
SwissprotO806741e-91BH106_ARATH; Transcription factor bHLH106
TrEMBLA0A0U2S8950.0A0A0U2S895_9R
STRINGPOPTR_0006s03550.11e-126(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF66723249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.12e-87bHLH family protein